STRINGSTRING
Solyc05g016440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g016440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g016440.2.1Uncharacterized protein (1011 aa)    
Predicted Functional Partners:
Solyc01g097320.2.1
Uncharacterized protein (1791 aa)
     
  0.966
Solyc04g081430.2.1
Uncharacterized protein (168 aa)
       
  0.964
Solyc08g065160.2.1
Uncharacterized protein (201 aa)
       
  0.949
Solyc12g027870.1.1
Uncharacterized protein (336 aa)
       
  0.944
Solyc12g027850.1.1
Uncharacterized protein (79 aa)
       
  0.944
Solyc03g046370.1.1
Uncharacterized protein (209 aa)
       
    0.928
Solyc03g046360.1.1
Uncharacterized protein (168 aa)
       
    0.928
Solyc06g083260.2.1
Uncharacterized protein (250 aa)
       
  0.812
Solyc03g083300.2.1
Uncharacterized protein (157 aa)
       
  0.807
Solyc12g044640.1.1
Uncharacterized protein (249 aa)
       
  0.794
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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