STRINGSTRING
Solyc05g018230.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g018230.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g018230.2.1Uncharacterized protein (410 aa)    
Predicted Functional Partners:
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
   
 
  0.734
Solyc09g091660.2.1
Uncharacterized protein (1440 aa)
   
 
  0.734
Solyc08g067620.2.1
Uncharacterized protein (1453 aa)
   
 
  0.734
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
       
  0.651
Solyc03g122100.1.1
Uncharacterized protein (409 aa)
       
 
  0.606
pGlcT3
Probable plastidic glucose transporter 2-like (479 aa)
 
   
  0.595
Solyc10g062110.1.1
Uncharacterized protein (87 aa)
 
   
  0.586
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
 
  0.559
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
         
  0.550
Solyc08g081320.2.1
Beta-adaptin-like protein ; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (896 aa)
       
    0.529
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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