STRINGSTRING
Solyc05g018320.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g018320.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g018320.2.1Uncharacterized protein (509 aa)    
Predicted Functional Partners:
Solyc08g076030.2.1
Uncharacterized protein (1135 aa)
       
 
  0.755
Solyc03g117360.2.1
Uncharacterized protein (1130 aa)
       
 
  0.755
Solyc03g118550.2.1
Uncharacterized protein (386 aa)
       
      0.564
Coi1
Coronatine-insensitive 1 (603 aa)
       
 
  0.542
Solyc06g065650.2.1
Uncharacterized protein (427 aa)
       
 
  0.538
Solyc06g068930.1.1
Uncharacterized protein (246 aa)
       
 
  0.536
Solyc03g118540.2.1
Uncharacterized protein (326 aa)
       
 
  0.536
Solyc01g103600.2.1
Uncharacterized protein (129 aa)
       
 
  0.480
Solyc08g036660.2.1
Uncharacterized protein (127 aa)
       
 
  0.473
Solyc08g036640.2.1
Uncharacterized protein (112 aa)
       
 
  0.473
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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