STRINGSTRING
Solyc05g018390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g018390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g018390.2.1Uncharacterized protein (647 aa)    
Predicted Functional Partners:
VIN3
Vernalization insensitive 3 (739 aa)
       
 
0.636
FIE
Fertilization-independent endosperm protein (372 aa)
       
 
  0.497
Solyc01g104490.2.1
Uncharacterized protein (2128 aa)
     
   
  0.440
EZ2
EZ2 (921 aa)
       
 
  0.428
EZ1
EZ1 (829 aa)
       
 
  0.428
Solyc03g025280.2.1
Uncharacterized protein (947 aa)
           
  0.426
Solyc11g006970.1.1
Uncharacterized protein (291 aa)
           
  0.418
pi2
Peptidyl-prolyl cis-trans isomerase CYP95 (809 aa)
           
  0.410
Solyc06g005370.2.1
Uncharacterized protein (494 aa)
     
   
  0.408
Solyc11g008440.1.1
Uncharacterized protein (555 aa)
           
  0.406
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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