STRINGSTRING
Solyc05g018410.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g018410.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g018410.1.1Uncharacterized protein (300 aa)    
Predicted Functional Partners:
Solyc02g022930.2.1
3-hydroxyisobutyrate dehydrogenase (344 aa)
   
 
  0.938
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
 
  0.898
Solyc08g006840.2.1
Uncharacterized protein (327 aa)
     
 
  0.882
Solyc06g082370.2.1
Uncharacterized protein (452 aa)
     
      0.881
Solyc09g091470.2.1
Uncharacterized protein (465 aa)
   
  0.880
Solyc09g061840.2.1
Uncharacterized protein (456 aa)
   
  0.880
Solyc07g045350.2.1
Uncharacterized protein (404 aa)
   
  0.880
Solyc05g017760.2.1
Uncharacterized protein (407 aa)
   
  0.880
Solyc04g015100.2.1
Uncharacterized protein (411 aa)
   
  0.880
Solyc03g119170.2.1
Uncharacterized protein (436 aa)
     
      0.871
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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