STRINGSTRING
Solyc05g018570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g018570.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g018570.2.1Uncharacterized protein (417 aa)    
Predicted Functional Partners:
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
   
0.998
Solyc03g123730.2.1
Uncharacterized protein (428 aa)
   
0.998
Solyc06g063140.2.1
Uncharacterized protein (429 aa)
   
0.998
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
     
  0.997
Solyc11g027920.1.1
Uncharacterized protein (115 aa)
     
  0.996
Solyc10g086580.1.1
Uncharacterized protein (445 aa)
     
  0.996
Solyc09g011080.2.1
Uncharacterized protein (439 aa)
     
  0.996
Solyc03g117850.2.1
Uncharacterized protein (442 aa)
     
  0.996
Solyc02g081700.1.1
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (248 aa)
     
  0.996
Solyc01g008370.2.1
Uncharacterized protein (310 aa)
     
  0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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