STRINGSTRING
Solyc05g023750.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g023750.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g023750.2.1Uncharacterized protein (817 aa)    
Predicted Functional Partners:
Solyc05g050600.2.1
Uncharacterized protein (609 aa)
     
  0.767
Solyc01g095970.2.1
Uncharacterized protein (610 aa)
     
  0.767
Solyc02g080040.2.1
Uncharacterized protein (445 aa)
       
  0.663
Solyc04g071680.1.1
Uncharacterized protein (919 aa)
     
  0.663
Solyc10g079170.1.1
Uncharacterized protein (888 aa)
     
  0.662
Solyc04g054200.2.1
Non-specific serine/threonine protein kinase (1058 aa)
     
  0.662
Solyc04g015600.2.1
Uncharacterized protein (894 aa)
     
  0.662
SlmCLV1
Leucine rich repeat receptor protein kinase CLAVATA1 (1016 aa)
     
  0.662
Solyc12g098100.1.1
Uncharacterized protein (1097 aa)
       
  0.650
Solyc12g008500.1.1
Uncharacterized protein (1008 aa)
       
  0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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