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STRINGSTRING
101257372 protein (Solanum lycopersicum) - STRING interaction network
"101257372" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257372annotation not available (115 aa)    
Predicted Functional Partners:
101258104
Thylakoid lumen 18.3 kDa protein (289 aa)
     
        0.888
SPA
Protein SPA, chloroplastic; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)
     
        0.885
Solyc02g068270.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 42 Blast hits to /.../teins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (215 aa)
     
        0.885
101259513
Chloroplast thylakoid lumen protein (210 aa)
     
        0.884
101254882
Uncharacterized protein; ATP synthase delta-subunit gene (250 aa)
     
        0.883
101243905
Thioredoxin superfamily protein (213 aa)
     
        0.882
Solyc08g006540.2.1
Peptidylprolyl isomerase; FK506-binding protein 13 (263 aa)
     
        0.881
101249276
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein matc /.../photosystem I P subunit (TAIR-AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species- Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (147 aa)
     
        0.881
101255672
Rubredoxin family protein (278 aa)
     
        0.881
101257241
Uncharacterized protein; DnaJ/Hsp40 cysteine-rich domain superfamily protein (132 aa)
     
        0.879
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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