STRINGSTRING
Solyc05g025510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g025510.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g025510.2.1Uncharacterized protein (580 aa)    
Predicted Functional Partners:
Solyc03g033380.2.1
Uncharacterized protein (484 aa)
     
 
  0.952
Solyc02g091720.1.1
Uncharacterized protein (386 aa)
     
 
  0.952
Solyc04g010120.2.1
Uncharacterized protein (425 aa)
     
 
  0.942
Solyc03g006580.2.1
Uncharacterized protein (242 aa)
     
 
  0.935
Solyc04g080900.2.1
Uncharacterized protein (681 aa)
     
 
  0.920
Solyc02g090650.2.1
Uncharacterized protein (709 aa)
     
 
  0.919
Solyc02g078700.2.1
Uncharacterized protein (190 aa)
     
 
  0.919
Solyc11g065750.1.1
Uncharacterized protein (674 aa)
     
 
  0.907
Solyc12g013920.1.1
Protein yippee-like (127 aa)
     
 
  0.821
Solyc03g096260.1.1
Protein yippee-like (153 aa)
     
 
  0.821
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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