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Solyc05g025810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g025810.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g025810.2.1annotation not available (354 aa)    
Predicted Functional Partners:
101251876
Uncharacterized protein; Cystathionine beta-synthase (CBS) family protein (420 aa)
   
   
  0.810
Solyc01g106570.2.1
annotation not available (436 aa)
         
  0.805
101254451
annotation not available (227 aa)
           
  0.800
Solyc04g064900.1.1
annotation not available (113 aa)
           
  0.800
101244177
annotation not available (1155 aa)
           
  0.800
101251453
annotation not available (635 aa)
           
  0.800
Solyc02g050330.1.1
annotation not available (51 aa)
           
  0.800
101263351
annotation not available (182 aa)
           
  0.800
101264670
BSD domain-containing protein (424 aa)
           
  0.800
101256627
Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation (741 aa)
           
  0.799
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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