STRINGSTRING
Solyc05g026550.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g026550.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g026550.2.1Uncharacterized protein (196 aa)    
Predicted Functional Partners:
Solyc10g054420.1.1
Uncharacterized protein (227 aa)
     
   
  0.608
Solyc09g083150.2.1
Uncharacterized protein (253 aa)
     
   
  0.489
Solyc03g062720.2.1
Uncharacterized protein (351 aa)
     
   
  0.489
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
     
   
  0.461
Solyc09g083190.2.1
Uncharacterized protein (216 aa)
     
   
  0.461
ndhA
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (187 aa)
           
  0.455
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
     
   
  0.446
Solyc07g032420.1.1
Uncharacterized protein (186 aa)
           
  0.435
Solyc04g057980.2.1
Uncharacterized protein (211 aa)
     
   
  0.434
Solyc11g006020.1.1
Uncharacterized protein (160 aa)
     
   
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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