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Solyc05g032750.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g032750.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g032750.2.1annotation not available (1104 aa)    
Predicted Functional Partners:
Solyc04g080040.2.1
J-domain protein required for chloroplast accumulation response 1 (724 aa)
     
   
  0.744
101254451
annotation not available (227 aa)
           
  0.675
101250630
Rubber elongation factor protein (REF) (287 aa)
           
  0.675
101253428
Rubber elongation factor protein (REF) (227 aa)
           
  0.675
101251210
annotation not available (227 aa)
           
  0.675
Solyc12g036860.1.1
annotation not available (352 aa)
           
  0.587
101259339
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Putative harbinger transposase-derived nuclease (InterPro-IPR006912); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacter /.../; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (391 aa)
           
  0.587
Solyc11g010560.1.1
TH65-like protein ; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1318 aa)
           
  0.583
101265552
Chaperone DnaJ-domain superfamily protein (487 aa)
     
   
  0.456
101261382
annotation not available (616 aa)
     
   
  0.437
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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