STRINGSTRING
Solyc05g032880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g032880.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g032880.2.1Uncharacterized protein (224 aa)    
Predicted Functional Partners:
Solyc08g083350.2.1
Uncharacterized protein (217 aa)
     
  0.979
Solyc02g082500.1.1
Uncharacterized protein (155 aa)
     
  0.979
Solyc04g014390.2.1
Uncharacterized protein (175 aa)
     
  0.975
Solyc08g075850.2.1
Uncharacterized protein (159 aa)
     
    0.973
Solyc07g063960.2.1
Uncharacterized protein (189 aa)
     
    0.973
Solyc01g008340.2.1
Putative L19 ribosomal protein (250 aa)
     
    0.973
Solyc03g114050.2.1
Uncharacterized protein (182 aa)
     
    0.971
Solyc08g078010.2.1
Uncharacterized protein (214 aa)
     
    0.969
Solyc04g017680.2.1
Uncharacterized protein (271 aa)
     
  0.966
Solyc08g067950.2.1
Uncharacterized protein (160 aa)
     
  0.965
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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