STRINGSTRING
Solyc05g043350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g043350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g043350.2.1Uncharacterized protein (537 aa)    
Predicted Functional Partners:
Solyc03g113000.2.1
Uncharacterized protein (790 aa)
     
  0.897
Solyc03g082680.2.1
Uncharacterized protein (2410 aa)
     
  0.892
Solyc04g071730.2.1
Uncharacterized protein (317 aa)
     
  0.843
Solyc03g033850.2.1
Uncharacterized protein (280 aa)
     
  0.843
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
  0.748
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
  0.748
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
  0.744
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
  0.744
Solyc03g025470.2.1
Kinesin-like protein (668 aa)
     
 
  0.743
Solyc11g007640.1.1
Uncharacterized protein (175 aa)
     
 
  0.735
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (16%) [HD]