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Solyc05g043430.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g043430.2.1" - alpha/beta-Hydrolases superfamily protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g043430.2.1alpha/beta-Hydrolases superfamily protein (220 aa)    
Predicted Functional Partners:
101247284
alpha/beta-Hydrolases superfamily protein (302 aa)
         
  0.969
101244107
Uncharacterized protein; Prefoldin 5 (147 aa)
           
  0.951
101267394
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (107 aa)
     
   
  0.854
101247157
BEST Arabidopsis thaliana protein match is- 3’-5’ exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR-AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species- Archae - 0; Bacteria /.../Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source- NCBI BLink) (277 aa)
           
  0.852
101258686
Semialdehyde dehydrogenase family protein (381 aa)
         
  0.849
101055519
Hop-interacting protein THI032 (401 aa)
     
   
  0.795
101264898
annotation not available (89 aa)
     
   
  0.687
101247875
annotation not available (100 aa)
     
   
  0.687
Solyc08g007220.2.1
annotation not available (310 aa)
           
  0.651
101255921
annotation not available (360 aa)
           
  0.651
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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