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STRINGSTRING
Solyc05g045840.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g045840.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g045840.1.1annotation not available (183 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.986
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.986
Solyc07g008270.2.1
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (87 aa)
   
 
  0.934
101251434
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family (502 aa)
   
 
  0.924
Solyc00g026870.1.1
annotation not available (465 aa)
     
 
  0.914
rps16
30S ribosomal protein S16 (132 aa)
   
 
  0.914
101256124
Ribosomal protein L1p/L10e family; Belongs to the universal ribosomal protein uL1 family (338 aa)
   
 
  0.890
Solyc12g062630.1.1
annotation not available (134 aa)
   
 
  0.887
Solyc08g006840.2.1
annotation not available (327 aa)
     
 
  0.850
101256335
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family (385 aa)
   
 
  0.836
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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