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STRINGSTRING
Solyc05g046350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g046350.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g046350.1.1annotation not available (100 aa)    
Predicted Functional Partners:
101255433
Aldolase-type TIM barrel family protein; Belongs to the TrpA family (347 aa)
 
 
  0.987
101250390
Aldolase-type TIM barrel family protein (411 aa)
 
   
  0.940
101244841
annotation not available (283 aa)
 
   
  0.918
101251295
annotation not available (275 aa)
 
   
  0.858
Solyc02g076760.2.1
annotation not available (206 aa)
 
   
  0.858
101249247
annotation not available (386 aa)
 
   
  0.813
101257271
Uncharacterized protein; Tryptophan biosynthesis 1 (401 aa)
 
   
  0.812
101265030
Uncharacterized protein; Anthranilate synthase 2 (587 aa)
 
   
  0.756
Solyc09g064430.2.1
annotation not available (468 aa)
           
  0.744
101263817
annotation not available (582 aa)
 
   
  0.727
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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