STRINGSTRING
Solyc05g047580.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g047580.2.1" - Terpene cyclase/mutase family member in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g047580.2.1Terpene cyclase/mutase family member (731 aa)    
Predicted Functional Partners:
Solyc01g087560.2.1
Methyltransferase (346 aa)
   
 
  0.978
Solyc10g080150.1.1
Methyltransferase (395 aa)
   
 
  0.978
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
   
 
  0.964
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
   
 
  0.900
Solyc06g076410.2.1
C-4 methyl sterol oxidase (269 aa)
   
 
  0.860
Solyc06g005750.2.1
Uncharacterized protein (265 aa)
   
 
  0.859
Solyc10g054130.1.1
Uncharacterized protein (436 aa)
 
   
  0.845
Solyc01g110290.2.1
Squalene synthase (411 aa)
 
   
  0.845
Solyc10g079040.1.1
Uncharacterized protein (310 aa)
 
   
  0.844
Solyc08g079570.2.1
Uncharacterized protein (296 aa)
     
 
  0.823
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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