STRINGSTRING
Solyc05g047640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g047640.2.1" - Palmitoyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g047640.2.1Palmitoyltransferase (218 aa)    
Predicted Functional Partners:
Solyc12g094610.1.1
Uncharacterized protein (537 aa)
     
 
  0.466
Solyc12g088360.1.1
Uncharacterized protein (275 aa)
     
 
  0.466
Solyc11g012440.1.1
Uncharacterized protein (459 aa)
     
 
  0.466
Solyc11g008390.1.1
Uncharacterized protein (624 aa)
     
 
  0.466
Solyc09g083060.2.1
Uncharacterized protein (574 aa)
     
 
  0.466
Solyc09g065210.2.1
Uncharacterized protein (708 aa)
     
 
  0.466
Solyc09g025270.2.1
Uncharacterized protein (749 aa)
     
 
  0.466
Solyc08g042100.2.1
Uncharacterized protein (480 aa)
     
 
  0.466
Solyc07g049390.1.1
Uncharacterized protein (569 aa)
     
 
  0.466
Solyc07g045220.2.1
Uncharacterized protein (394 aa)
     
 
  0.466
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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