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STRINGSTRING
Solyc05g048860.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g048860.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g048860.2.1annotation not available (120 aa)    
Predicted Functional Partners:
CNOT1
Uncharacterized protein; Transcription regulators (2411 aa)
     
 
  0.952
101258934
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (529 aa)
   
 
  0.937
101259228
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (471 aa)
   
 
  0.937
Solyc08g075300.2.1
annotation not available (317 aa)
     
 
  0.923
101266037
annotation not available (695 aa)
     
 
  0.923
101268571
Uncharacterized protein; Decapping 5 (599 aa)
     
 
  0.923
101264508
annotation not available (434 aa)
     
 
  0.923
101245924
Uncharacterized protein; Transcription regulator NOT2/NOT3/NOT5 family protein (848 aa)
     
 
  0.860
101243815
annotation not available (364 aa)
     
 
  0.838
101254498
annotation not available (369 aa)
     
 
  0.838
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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