STRINGSTRING
Solyc05g050380.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g050380.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g050380.2.1Uncharacterized protein (607 aa)    
Predicted Functional Partners:
Solyc02g070890.2.1
Non-specific serine/threonine protein kinase (1169 aa)
       
    0.804
Solyc02g070910.1.1
Uncharacterized protein (958 aa)
         
    0.800
Solyc12g098150.1.1
Uncharacterized protein (330 aa)
       
  0.591
Solyc11g067160.1.1
Uncharacterized protein (398 aa)
       
  0.591
Solyc09g098090.2.1
Uncharacterized protein (345 aa)
       
  0.591
Solyc09g098000.2.1
Uncharacterized protein (349 aa)
       
  0.591
Solyc09g097990.1.1
Uncharacterized protein (90 aa)
       
  0.591
Solyc09g097980.2.1
Uncharacterized protein (351 aa)
       
  0.591
Solyc09g097970.2.1
Uncharacterized protein (346 aa)
       
  0.591
Solyc09g097960.2.1
Uncharacterized protein (346 aa)
       
  0.591
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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