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101246723 protein (Solanum lycopersicum) - STRING interaction network
"101246723" - E3 ubiquitin-protein ligase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246723E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (331 aa)    
Predicted Functional Partners:
Solyc03g123860.2.1
annotation not available (1104 aa)
       
 
  0.702
101257150
annotation not available (1115 aa)
       
 
  0.619
101257447
annotation not available (1115 aa)
       
 
  0.619
101252978
annotation not available (162 aa)
     
   
  0.572
101267002
Uncharacterized protein; Transmembrane amino acid transporter family protein (525 aa)
           
  0.568
101261342
annotation not available (342 aa)
       
 
  0.542
101251046
annotation not available (146 aa)
       
      0.534
Suv
annotation not available (160 aa)
       
      0.534
101253818
annotation not available (146 aa)
       
      0.534
101261024
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (413 aa)
       
 
  0.504
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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