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STRINGSTRING
101245062 protein (Solanum lycopersicum) - STRING interaction network
"101245062" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245062Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (162 aa)    
Predicted Functional Partners:
101255133
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (576 aa)
       
 
  0.963
101255306
Unknown protein; Has 52 Blast hits to 52 proteins in 18 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (88 aa)
           
  0.930
Solyc11g005020.1.1
annotation not available (1011 aa)
           
  0.844
101264070
annotation not available (645 aa)
           
  0.834
101246508
annotation not available (415 aa)
           
  0.612
Solyc07g052560.1.1
annotation not available (199 aa)
           
  0.612
Solyc12g038600.1.1
RHOMBOID-like protein 12 (190 aa)
           
  0.573
Solyc12g038590.1.1
annotation not available (197 aa)
           
  0.573
101255430
Mitochondrial Rho GTPase; MIRO-related GTP-ase 2 (643 aa)
           
  0.572
101263208
Uncharacterized protein; Cytochrome B5 isoform A (133 aa)
           
  0.568
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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