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STRINGSTRING
Solyc05g050970.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g050970.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g050970.2.1annotation not available (774 aa)    
Predicted Functional Partners:
TAL
Transaldolase (437 aa)
 
  0.996
LOC543811
Uncharacterized protein; Transaldolase ToTAL2 (397 aa)
 
  0.993
Solyc05g007260.2.1
annotation not available (216 aa)
   
  0.985
101264109
Uncharacterized protein; D-ribulose-5-phosphate-3-epimerase (282 aa)
   
  0.984
SBPase
Chloroplast sedoheptulose-1,7-bisphosphatase (394 aa)
   
 
  0.974
101260137
annotation not available (268 aa)
   
  0.965
101262594
Glucose-6-phosphate isomerase ; Belongs to the GPI family (568 aa)
   
  0.963
543945
Glucose-6-phosphate isomerase ; Belongs to the GPI family (617 aa)
   
  0.963
101267287
Uncharacterized protein; Phosphoglucomutase (632 aa)
   
 
  0.960
101264255
annotation not available (293 aa)
   
  0.960
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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