STRINGSTRING
Solyc05g051410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g051410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g051410.2.1Uncharacterized protein (344 aa)    
Predicted Functional Partners:
cdkB1
B1-type cyclin dependent kinase (303 aa)
       
  0.982
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
       
  0.969
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
       
  0.968
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.940
JMJ524
Putative lysine-specific demethylase JMJD5 (398 aa)
           
  0.911
Solyc01g108610.2.1
Uncharacterized protein (218 aa)
       
 
  0.908
krp2
P27KIP1-related-protein 2 (188 aa)
       
 
  0.904
Solyc01g005250.2.1
Uncharacterized protein (381 aa)
       
      0.902
Solyc12g006320.1.1
Uncharacterized protein (643 aa)
       
      0.900
Solyc07g044760.2.1
Uncharacterized protein (630 aa)
       
      0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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