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STRINGSTRING
LOC544102 protein (Solanum lycopersicum) - STRING interaction network
"LOC544102" - Histone H3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC544102Histone H3 (136 aa)    
Predicted Functional Partners:
101268556
annotation not available (136 aa)
       
 
0.948
101267861
annotation not available (136 aa)
       
 
0.948
Solyc02g077480.1.1
Histone superfamily protein (136 aa)
       
 
0.948
Solyc01g086820.2.1
Histone superfamily protein (136 aa)
       
 
0.948
101252717
annotation not available (136 aa)
       
 
0.948
101260571
annotation not available (136 aa)
       
 
0.948
Solyc01g074000.2.1
annotation not available (136 aa)
       
 
0.948
Solyc01g073970.2.1
annotation not available (136 aa)
       
 
0.948
Solyc01g086800.2.1
annotation not available (85 aa)
       
 
0.943
Solyc06g010200.2.1
annotation not available (1613 aa)
       
 
  0.910
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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