STRINGSTRING
Solyc05g051540.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g051540.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g051540.1.1Uncharacterized protein (130 aa)    
Predicted Functional Partners:
Solyc12g019640.1.1
Uncharacterized protein (608 aa)
   
  0.875
Solyc12g019620.1.1
Uncharacterized protein (837 aa)
   
  0.842
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
   
  0.827
Solyc09g042300.1.1
Uncharacterized protein (86 aa)
   
  0.827
Solyc09g042280.1.1
Uncharacterized protein (111 aa)
   
  0.827
Solyc11g067300.1.1
Uncharacterized protein (1260 aa)
     
 
  0.804
Solyc07g018130.1.1
Uncharacterized protein (1275 aa)
     
 
  0.804
Solyc03g093650.2.1
Uncharacterized protein (1227 aa)
     
 
  0.804
Solyc11g065710.1.1
Uncharacterized protein (772 aa)
       
 
  0.718
Solyc00g283010.1.1
Annotation not available (645 aa)
       
 
  0.718
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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