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STRINGSTRING
101250695 protein (Solanum lycopersicum) - STRING interaction network
"101250695" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250695Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source- NCBI BLink) (246 aa)    
Predicted Functional Partners:
101267023
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (353 aa)
   
          0.433
101245980
annotation not available (354 aa)
   
          0.428
Solyc10g085900.1.1
annotation not available (306 aa)
   
          0.414
101258059
Uncharacterized protein; Cofactor assembly of complex C (280 aa)
   
        0.402
101248838
Ribosomal protein S21 family protein (185 aa)
   
          0.401
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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