STRINGSTRING
Solyc05g052100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052100.2.1" - Glutamate dehydrogenase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052100.2.1Glutamate dehydrogenase (413 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
 
  0.997
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
   
 
  0.992
Solyc10g038080.1.1
Uncharacterized protein (514 aa)
     
 
  0.849
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
     
 
  0.849
Solyc08g044270.2.1
Uncharacterized protein (233 aa)
   
 
  0.803
PRO2
Delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (720 aa)
         
  0.738
Solyc06g019170.2.1
Uncharacterized protein (717 aa)
         
  0.738
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
   
   
  0.610
Solyc11g011930.1.1
Isocitrate dehydrogenase [NADP] (420 aa)
     
  0.606
Solyc02g086610.2.1
Isocitrate dehydrogenase [NADP] (471 aa)
     
  0.606
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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