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STRINGSTRING
101244375 protein (Solanum lycopersicum) - STRING interaction network
"101244375" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244375annotation not available (368 aa)    
Predicted Functional Partners:
LAT56
Probable pectate lyase P56; Might be needed during pollen development and tube growth (398 aa)
 
 
  0.789
101257960
annotation not available (456 aa)
 
 
  0.781
101250914
annotation not available (439 aa)
 
 
  0.780
101260096
annotation not available (446 aa)
 
 
  0.776
Solyc09g005850.2.1
annotation not available (326 aa)
 
   
  0.776
101267397
Pectin lyase-like superfamily protein (336 aa)
 
   
  0.775
101246909
annotation not available (435 aa)
 
 
  0.769
101257697
Pectin lyase-like superfamily protein (483 aa)
 
   
  0.762
101249735
annotation not available (435 aa)
 
 
  0.762
LAT59
Probable pectate lyase P59; Might be needed during pollen development and tube growth (449 aa)
 
 
  0.759
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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