STRINGSTRING
Solyc05g052310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052310.2.1Uncharacterized protein (243 aa)    
Predicted Functional Partners:
Solyc01g104930.1.1
Uncharacterized protein (183 aa)
     
  0.974
Solyc01g104920.2.1
Uncharacterized protein (692 aa)
     
  0.974
Solyc12g089150.1.1
Uncharacterized protein (129 aa)
     
  0.973
Solyc12g014550.1.1
Uncharacterized protein (153 aa)
     
  0.973
Solyc10g081060.1.1
Uncharacterized protein (223 aa)
     
  0.973
Solyc07g065030.2.1
Uncharacterized protein (209 aa)
     
  0.973
Solyc05g013050.2.1
Uncharacterized protein (221 aa)
     
  0.972
Solyc03g115760.2.1
Uncharacterized protein (221 aa)
     
  0.972
Solyc12g049420.1.1
Uncharacterized protein (218 aa)
     
  0.970
Solyc06g063030.2.1
Uncharacterized protein (218 aa)
     
  0.970
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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