STRINGSTRING
Solyc05g052310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052310.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052310.2.1annotation not available (243 aa)    
Predicted Functional Partners:
101259553
annotation not available (199 aa)
     
 
  0.956
101266478
Gamma-soluble NSF attachment protein (295 aa)
     
 
  0.944
104647326
Vesicle transport v-SNARE family protein (221 aa)
     
 
  0.941
101266321
annotation not available (221 aa)
     
 
  0.941
101263154
Uncharacterized protein; Syntaxin of plants 42; Belongs to the syntaxin family (319 aa)
     
 
  0.929
101265370
annotation not available (324 aa)
     
 
  0.929
101257479
annotation not available (306 aa)
     
 
  0.925
Solyc05g012520.2.1
Uncharacterized protein; Soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (248 aa)
     
 
  0.925
101265526
annotation not available (343 aa)
     
 
  0.925
Solyc01g104930.1.1
annotation not available (183 aa)
     
 
  0.917
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]