STRINGSTRING
Solyc05g052410.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052410.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052410.1.1Uncharacterized protein (399 aa)    
Predicted Functional Partners:
Solyc04g010080.2.1
Uncharacterized protein (729 aa)
       
      0.489
Solyc11g071840.1.1
Uncharacterized protein (448 aa)
           
  0.470
Solyc11g017070.1.1
Eukaryotic translation initiation factor 3 subunit I ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (326 aa)
           
  0.470
Solyc11g010170.1.1
Uncharacterized protein (424 aa)
           
  0.470
Solyc10g079480.1.1
Uncharacterized protein (500 aa)
           
  0.470
Solyc08g082350.2.1
Uncharacterized protein (411 aa)
           
  0.470
Solyc08g006170.1.1
Uncharacterized protein (474 aa)
           
  0.470
Solyc03g112670.2.1
Uncharacterized protein (337 aa)
           
  0.470
Solyc03g112630.2.1
Uncharacterized protein (428 aa)
           
  0.470
Solyc03g093310.2.1
Uncharacterized protein (500 aa)
           
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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