STRINGSTRING
Solyc05g052490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052490.2.1Uncharacterized protein (766 aa)    
Predicted Functional Partners:
Solyc12g098550.1.1
Uncharacterized protein (394 aa)
       
 
  0.727
Solyc02g032570.1.1
Uncharacterized protein (106 aa)
       
 
  0.727
Solyc00g096060.1.1
Annotation not available (135 aa)
       
 
  0.727
Solyc08g016010.2.1
Uncharacterized protein (480 aa)
       
 
0.586
Solyc12g098540.1.1
Uncharacterized protein (454 aa)
       
 
0.583
Solyc12g096560.1.1
Uncharacterized protein (472 aa)
       
 
0.582
Solyc09g092400.1.1
Uncharacterized protein (451 aa)
       
 
0.582
Solyc02g032550.1.1
Uncharacterized protein (373 aa)
       
 
0.581
Solyc02g081980.2.1
Uncharacterized protein (434 aa)
       
 
0.581
Solyc02g032560.1.1
Uncharacterized protein (237 aa)
       
 
0.580
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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