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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc05g052550.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052550.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052550.1.1annotation not available (119 aa)    
Predicted Functional Partners:
Solyc02g081950.2.1
annotation not available (241 aa)
       
 
  0.623
Solyc08g067990.1.1
annotation not available (803 aa)
     
   
  0.619
101251304
annotation not available (762 aa)
     
   
  0.619
101267878
annotation not available (406 aa)
           
  0.555
101260153
annotation not available (442 aa)
           
  0.555
101268568
annotation not available (444 aa)
           
  0.555
101258501
annotation not available (465 aa)
           
  0.555
Solyc10g076270.1.1
annotation not available (616 aa)
     
      0.529
Solyc10g076260.1.1
annotation not available (542 aa)
     
      0.529
101246173
annotation not available (1353 aa)
     
      0.529
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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