STRINGSTRING
Solyc05g052760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052760.2.1" - PI-phospholipase C PLC3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052760.2.1PI-phospholipase C PLC3 (583 aa)    
Predicted Functional Partners:
Solyc12g019880.1.1
Uncharacterized protein (754 aa)
     
  0.976
Solyc11g013180.1.1
Uncharacterized protein (818 aa)
     
  0.976
Solyc10g086320.1.1
Uncharacterized protein (789 aa)
     
  0.976
Solyc10g078460.1.1
Uncharacterized protein (763 aa)
     
  0.976
Solyc09g008480.2.1
Uncharacterized protein (813 aa)
     
  0.976
Solyc04g015470.2.1
Uncharacterized protein (749 aa)
     
  0.976
Solyc01g104140.2.1
Uncharacterized protein (774 aa)
     
  0.976
Solyc01g096410.2.1
Uncharacterized protein (779 aa)
     
  0.976
Solyc10g080750.1.1
Uncharacterized protein (426 aa)
     
  0.957
Solyc04g017620.2.1
Uncharacterized protein (207 aa)
     
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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