STRINGSTRING
Solyc05g052980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g052980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g052980.2.1Uncharacterized protein (409 aa)    
Predicted Functional Partners:
Solyc08g077780.2.1
Uncharacterized protein (339 aa)
   
  0.992
Solyc01g108280.2.1
Uncharacterized protein (362 aa)
   
  0.992
Solyc12g095970.1.1
Uncharacterized protein (190 aa)
       
  0.980
Solyc09g015380.1.1
Uncharacterized protein (201 aa)
       
  0.980
Solyc08g076960.1.1
Uncharacterized protein (231 aa)
       
  0.944
Solyc06g061180.1.1
Uncharacterized protein (213 aa)
       
  0.944
Solyc08g082180.2.1
Uncharacterized protein (189 aa)
       
  0.941
Solyc03g007310.2.1
Uncharacterized protein (185 aa)
       
  0.941
Solyc12g098910.1.1
Uncharacterized protein (467 aa)
   
  0.930
Solyc12g077370.1.1
Uncharacterized protein (229 aa)
   
  0.930
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]