• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101248201 protein (Solanum lycopersicum) - STRING interaction network
"101248201" - AT-hook motif nuclear-localized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248201AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (313 aa)    
Predicted Functional Partners:
101268227
Uncharacterized protein; CCR-like (129 aa)
           
  0.775
101258493
annotation not available (185 aa)
           
  0.772
LOC778307
Floral homeotic protein DEFICIENS (228 aa)
           
  0.689
Solyc01g108930.2.1
annotation not available (285 aa)
           
  0.660
TDR6
TDR6 protein (225 aa)
           
  0.577
101247526
bZIP transcription factor family protein (484 aa)
           
  0.574
LOC544157
Late embryogenesis (Lea)-like protein (174 aa)
           
  0.517
ER5
Ethylene-responsive late embryogenesis-like protein (160 aa)
           
  0.517
101249847
annotation not available (335 aa)
           
  0.499
TMT
Uncharacterized protein; Gamma-tocopherol methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family (369 aa)
           
  0.474
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]