STRINGSTRING
Solyc05g053480.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g053480.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g053480.2.1Uncharacterized protein (289 aa)    
Predicted Functional Partners:
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
 
 
  0.996
Solyc06g006080.2.1
Thiamine biosynthesis protein ThiC variant L1; Thiamine biosynthesis protein ThiC variant L2; Thiamine biosynthesis protein ThiC variant S (651 aa)
   
 
  0.783
Solyc11g007570.1.1
Uncharacterized protein (225 aa)
   
 
  0.689
Solyc00g024040.1.1
Annotation not available (477 aa)
       
  0.569
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
   
   
  0.489
Solyc02g079100.2.1
Uncharacterized protein (385 aa)
       
  0.487
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
   
   
  0.481
Solyc11g073160.1.1
Uncharacterized protein (482 aa)
         
  0.479
Solyc11g010300.1.1
Uncharacterized protein (551 aa)
         
  0.479
ribA
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase (552 aa)
         
  0.479
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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