STRINGSTRING
Solyc05g054100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g054100.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g054100.2.1Uncharacterized protein (289 aa)    
Predicted Functional Partners:
Solyc09g008610.2.1
Uncharacterized protein (982 aa)
     
 
  0.990
Solyc01g097740.2.1
Uncharacterized protein (300 aa)
     
 
  0.989
Solyc08g006650.2.1
Uncharacterized protein (178 aa)
     
 
  0.985
Solyc10g005780.2.1
Uncharacterized protein (204 aa)
     
 
  0.966
Solyc07g009160.2.1
Uncharacterized protein (204 aa)
     
 
  0.966
Solyc04g047720.2.1
Uncharacterized protein (205 aa)
       
 
  0.728
Solyc08g041980.2.1
Uncharacterized protein (203 aa)
       
 
  0.635
Solyc06g065930.2.1
Uncharacterized protein (197 aa)
       
 
  0.635
Solyc10g080200.1.1
Stress-associated protein 12 (272 aa)
       
      0.607
Solyc04g015570.2.1
Stress-associated protein 13 (277 aa)
       
      0.607
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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