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Solyc05g054910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g054910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g054910.2.1Uncharacterized protein; SAC3/GANP/Nin1/mts3/eIF-3 p25 family (961 aa)    
Predicted Functional Partners:
101245076
Proteasome family protein (415 aa)
     
 
  0.963
101247472
annotation not available (1846 aa)
     
        0.826
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
        0.826
Solyc01g111530.2.1
annotation not available (1860 aa)
     
        0.826
Solyc00g063510.1.1
annotation not available (221 aa)
     
   
  0.649
101249287
annotation not available (267 aa)
           
  0.578
Solyc10g044990.1.1
annotation not available (153 aa)
           
  0.567
101244534
annotation not available (487 aa)
           
  0.567
101255444
annotation not available (484 aa)
           
  0.567
101261244
Uncharacterized protein; Homolog of yeast FIP1 [V] (1380 aa)
     
   
  0.563
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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