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STRINGSTRING
101250408 protein (Solanum lycopersicum) - STRING interaction network
"101250408" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250408annotation not available (228 aa)    
Predicted Functional Partners:
101251285
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (602 aa)
           
  0.777
101252299
annotation not available (222 aa)
           
  0.648
Solyc02g081610.1.1
Uncharacterized protein; Phosphatidylinositolglycan synthase family protein (303 aa)
           
  0.648
101247893
Uncharacterized protein; Mitochondrial RNAediting factor 1 (596 aa)
           
  0.605
101246967
Uncharacterized protein; Hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases (785 aa)
       
 
  0.573
Solyc07g064070.1.1
annotation not available (453 aa)
   
   
  0.572
101245317
D-Tyr-tRNA(Tyr) deacylase family protein (153 aa)
           
  0.564
101244861
annotation not available (236 aa)
           
  0.510
101261054
annotation not available (483 aa)
     
   
  0.484
Solyc01g094310.1.1
annotation not available (91 aa)
     
   
  0.484
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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