STRINGSTRING
Solyc05g055060.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g055060.2.1" - Serine/threonine-protein phosphatase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g055060.2.1Serine/threonine-protein phosphatase (325 aa)    
Predicted Functional Partners:
Solyc03g007100.2.1
Uncharacterized protein (1425 aa)
     
    0.979
Solyc03g097990.2.1
Uncharacterized protein (193 aa)
       
    0.979
Solyc08g067040.2.1
Uncharacterized protein (764 aa)
     
  0.972
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
    0.971
Solyc07g049480.2.1
Uncharacterized protein (731 aa)
     
    0.948
Solyc02g070240.2.1
Uncharacterized protein (671 aa)
     
  0.948
Solyc02g021760.2.1
Uncharacterized protein (689 aa)
     
  0.948
Solyc12g099280.1.1
Uncharacterized protein (1130 aa)
       
    0.947
Solyc04g015170.2.1
Uncharacterized protein (423 aa)
       
 
  0.929
Solyc12g035360.1.1
Uncharacterized protein (333 aa)
       
    0.920
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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