STRINGSTRING
Solyc05g056210.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g056210.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g056210.2.1Uncharacterized protein (1094 aa)    
Predicted Functional Partners:
Solyc08g066730.2.1
Uncharacterized protein (739 aa)
     
0.967
Solyc03g112520.2.1
Uncharacterized protein (342 aa)
     
  0.725
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
 
    0.610
Solyc12g014400.1.1
Uncharacterized protein (283 aa)
       
      0.575
Solyc10g006220.2.1
Uncharacterized protein (327 aa)
       
      0.575
Solyc10g006190.2.1
Uncharacterized protein (317 aa)
       
      0.575
Solyc10g006170.2.1
Uncharacterized protein (285 aa)
       
      0.575
Solyc07g051810.1.1
Uncharacterized protein (352 aa)
       
      0.575
Solyc07g049800.1.1
Uncharacterized protein (226 aa)
       
      0.575
Solyc07g049790.1.1
Uncharacterized protein (236 aa)
       
      0.575
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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