STRINGSTRING
Solyc05g056340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g056340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g056340.2.1Uncharacterized protein (804 aa)    
Predicted Functional Partners:
Solyc11g045320.1.1
Uncharacterized protein (145 aa)
       
 
  0.767
Solyc10g048000.1.1
Uncharacterized protein (296 aa)
       
 
  0.767
Solyc10g047980.1.1
Uncharacterized protein (219 aa)
       
 
  0.767
Solyc10g047970.1.1
Uncharacterized protein (226 aa)
       
 
  0.767
Solyc07g041320.1.1
Uncharacterized protein (211 aa)
       
 
  0.767
Solyc05g006540.2.1
Uncharacterized protein (1360 aa)
       
 
  0.767
Solyc04g025000.1.1
Uncharacterized protein (193 aa)
       
 
  0.767
Solyc04g024990.1.1
Uncharacterized protein (273 aa)
       
 
  0.767
Solyc02g087390.1.1
Uncharacterized protein (509 aa)
       
 
  0.767
Solyc02g087380.1.1
Uncharacterized protein (137 aa)
       
 
  0.767
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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