STRINGSTRING
Solyc05g056390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc05g056390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g056390.2.1Uncharacterized protein (97 aa)    
Predicted Functional Partners:
Solyc11g069790.1.1
Uncharacterized protein (588 aa)
   
 
  0.996
Solyc09g091180.2.1
Uncharacterized protein (579 aa)
   
 
  0.996
Solyc06g075010.2.1
Uncharacterized protein (589 aa)
   
 
  0.996
Solyc05g053470.2.1
Uncharacterized protein (573 aa)
   
 
  0.996
Solyc05g010240.2.1
Uncharacterized protein (541 aa)
   
 
  0.996
Solyc03g121640.2.1
Uncharacterized protein (573 aa)
   
 
  0.996
Solyc03g120850.2.1
Uncharacterized protein (605 aa)
   
 
  0.996
Solyc02g068730.2.1
Uncharacterized protein (583 aa)
   
 
  0.996
Solyc02g044030.1.1
Uncharacterized protein (339 aa)
   
 
  0.996
Solyc01g028810.2.1
Uncharacterized protein (599 aa)
   
 
  0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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