STRINGSTRING
Solyc06g005190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005190.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005190.2.1Uncharacterized protein (1019 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 (2411 aa)
     
  0.975
Solyc12g019860.1.1
Uncharacterized protein (848 aa)
     
  0.925
Solyc11g072940.1.1
Uncharacterized protein (628 aa)
     
  0.902
Solyc06g075590.2.1
Uncharacterized protein (621 aa)
     
  0.902
Solyc04g078910.2.1
Uncharacterized protein (215 aa)
     
  0.902
Solyc10g078950.1.1
Uncharacterized protein (561 aa)
     
  0.897
Solyc08g075010.2.1
Uncharacterized protein (389 aa)
     
  0.897
Solyc03g059010.2.1
Uncharacterized protein (594 aa)
     
  0.897
Solyc01g008370.2.1
Uncharacterized protein (310 aa)
     
      0.809
Solyc12g044740.1.1
Uncharacterized protein (483 aa)
       
      0.802
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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