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STRINGSTRING
Solyc06g005350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005350.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005350.2.1annotation not available (144 aa)    
Predicted Functional Partners:
101259410
annotation not available (444 aa)
       
 
  0.869
101261051
annotation not available (444 aa)
       
 
  0.869
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor; Rab-GDP dissociation inhibitor ; Belongs to the Rab GDI family (445 aa)
       
 
  0.869
Solyc06g076460.2.1
BTB/POZ domain-containing protein; Belongs to the SKP1 family (82 aa)
       
      0.775
101250423
Uncharacterized protein; Vacuoleless1 (VCL1) (843 aa)
       
 
  0.771
Solyc12g096290.1.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (765 aa)
     
 
  0.713
101268139
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (804 aa)
     
 
  0.713
101256240
Rab escort protein (552 aa)
       
 
  0.685
Rab1B
Small GTP-binding protein (202 aa)
   
 
0.679
Rab1A
Small GTP-binding protein (203 aa)
   
 
0.677
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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