STRINGSTRING
Solyc06g005430.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005430.1.1" - Histone H4 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005430.1.1Histone H4 (103 aa)    
Predicted Functional Partners:
Solyc05g008480.2.1
Uncharacterized protein (193 aa)
     
 
  0.939
Solyc02g091110.2.1
Uncharacterized protein (193 aa)
     
 
  0.939
Solyc02g063290.2.1
Uncharacterized protein (181 aa)
     
 
  0.939
Solyc02g068580.1.1
Uncharacterized protein (468 aa)
       
  0.933
Solyc12g094440.1.1
Uncharacterized protein (285 aa)
     
  0.932
Solyc12g016190.1.1
Uncharacterized protein (316 aa)
     
  0.932
Solyc09g091960.2.1
Uncharacterized protein (462 aa)
     
  0.932
Solyc02g087710.2.1
Uncharacterized protein (639 aa)
     
  0.929
Solyc12g006830.1.1
Histone H2A (135 aa)
     
  0.910
Solyc06g084090.2.1
Histone H2A (203 aa)
     
  0.910
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]