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Solyc06g005580.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005580.2.1" - Rhomboid-like protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005580.2.1Rhomboid-like protein (387 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.633
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.570
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
   
   
  0.480
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
              0.461
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.453
Solyc12g038600.1.1
Rhomboid-like protein (190 aa)
           
  0.443
Solyc12g038590.1.1
Rhomboid-like protein (197 aa)
           
  0.443
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
         
  0.436
Solyc08g068270.2.1
Rhomboid-like protein (276 aa)
   
     
  0.435
Solyc03g120470.2.1
MIP (1264 aa)
   
 
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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