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STRINGSTRING
Solyc06g005670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005670.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005670.2.1annotation not available (945 aa)    
Predicted Functional Partners:
101247472
annotation not available (1846 aa)
     
        0.846
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
        0.846
Solyc01g111530.2.1
annotation not available (1860 aa)
     
        0.846
BAC19.3
BAC19.3 (425 aa)
           
  0.670
Solyc03g123640.2.1
Uncharacterized protein; Pumilio 23 (762 aa)
     
   
  0.669
101251929
Uncharacterized protein; Haloacid dehalogenase-like hydrolase family protein (1077 aa)
     
 
  0.629
101267002
Uncharacterized protein; Transmembrane amino acid transporter family protein (525 aa)
       
 
  0.624
101261771
annotation not available (528 aa)
           
  0.612
101265827
annotation not available (544 aa)
           
  0.612
101267272
annotation not available (79 aa)
       
 
  0.574
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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